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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs10491100 chr17:12586596 A/G COPS3 chr17:17150134-17184607:- -0.67 -6.02 4.09E-9 Box Plot
BLCA rs10495789 chr2:33719109 A/G RIMKLA chr1:42846466-42888249:+ -0.48 -6.02 4.18E-9 Box Plot
BLCA rs10496347 chr2:101065210 C/T LOC285359 chr3:101431278-101432259:+ -0.37 -7.08 7.14E-12 Box Plot
BLCA rs10497538 chr2:180271759 A/C ATP5G3 chr2:176040986-176049335:- -0.71 -6.43 3.79E-10 Box Plot
BLCA rs10497538 chr2:180271759 A/C C2orf47 chr2:200820040-200873263:+ -0.81 -6.12 2.32E-9 Box Plot
BLCA rs10497538 chr2:180271759 A/C DYNC1I2 chr2:172543919-172604930:+ -0.73 -6.31 7.62E-10 Box Plot
BLCA rs10497538 chr2:180271759 A/C HNRNPA3 chr2:178077291-178088686:+ -0.87 -6.16 1.84E-9 Box Plot
BLCA rs10497538 chr2:180271759 A/C KCTD18 chr2:201353675-201384507:- -0.72 -6.46 3.16E-10 Box Plot
BLCA rs10497538 chr2:180271759 A/C MTX2 chr2:177134123-177202753:+ -0.73 -6.4 4.6E-10 Box Plot
BLCA rs10497538 chr2:180271759 A/C NCKAP1 chr2:183773843-183903586:- -0.53 -6 4.46E-9 Box Plot
BLCA rs10497538 chr2:180271759 A/C ORMDL1 chr2:190635049-190649097:- -0.74 -6.17 1.69E-9 Box Plot
BLCA rs10497538 chr2:180271759 A/C SSB chr2:170648443-170668574:+ -0.73 -6.19 1.54E-9 Box Plot
BLCA rs10501773 chr11:91884577 A/G ANKRD49 chr11:94226795-94232749:+ 0.71 6.16 1.89E-9 Box Plot
BLCA rs10503195 chr8:2970477 C/T CSMD1 chr8:2792875-4852494:- -0.42 -5.97 5.56E-9 Box Plot
BLCA rs10503778 chr8:25743392 A/G ADAP1 chr7:937538-995043:- 0.72 6.03 3.93E-9 Box Plot